We offer cleanup, normalization and assembly of the following Illumina-based data types (including single-cell sequencing from Fluidigm C1 devices):
- Illumina sequencing and related adapters (TruSeq Universal, TruSeq2, TruSeq3)
- Agilent HaloPlex adapters from enrichment assays
- Evrogen MINT/MINT2 protocol adapters (Supported sample pre-processing methods) + Illumina sequencing adapters
- Clontech SMART protocol adapters (Supported sample pre-processing methods) + Illumina sequencing adapters, for example:
- SMARTer Stranded Total RNA-Seq Kit – Pico Input Mammalian
- SMARTer Stranded RNA-Seq Kits—Strand-Specific Library Construction for Transcriptome Analysis on Illumina Platforms
- SMARTer Stranded Total RNA Sample Prep Kit – HI Mammalian—Strand-Specific RNA-Seq Libraries for Illumina Platforms from High-Input Total RNA
- SMARTer Universal Low Input RNA Kit—cDNA Synthesis for NGS from Degraded Samples
- + many more variants offered by Clontech
- full-length cDNA adapters (Supported sample pre-processing methods)
Products
We offer data cleanup, error-correction, normalization, cleanup, assembly, reference mapping, variant calling, annotation.